Eric W. Van De Weg

Whole genome sequence improvement with pedigree information and reference genotypic profiles, demonstrated in outcrossing apple

The paper improves whole genome sequence quality using pedigree information and reference genotypic profiles, demonstrating the approach in apple genomes.

Integration of Infinium and Axiom SNP array data in the outcrossing species Malus x domestica and causes for seemingly incompatible calls

This paper integrates Infinium and Axiom SNP array data in apple, identifies compatible SNPs, and highlights challenges in data integration.

High-quality, genome-wide SNP genotypic data for pedigreed germplasm of the diploid outbreeding species apple, peach, and sweet cherry through a common workflow

The paper develops a workflow to generate high-quality SNP genotypic data for apple, peach, and sweet cherry using pedigree records and inheritance principles, resulting in curated haploblock data sets.