Author

Stephen Ashley

University of AucklandORCID 0000-0001-7264-3337Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:mouse· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alanna CallendrelloiD· 1 shared Alex GreyiD· 1 shared Bradford P. TayloriD· 1 shared Hannah M. ReadiD· 1 shared Hemanoel Passarelli‐AraujoiD· 1 shared Madikay SenghoreiD· 1 shared Matthew R. GoddardiD· 1 shared Priyali OzaiD· 1 shared

Activity by Year

2022-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenomics

Alanna CallendrelloORCID

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1 paper

Recent·Most cited

GenomicsbioRxivPreprintOct 17, 2022

Beyond consensus sequence: a quantitative scheme for inferring transmission using deep sequencing in a bacterial transmission model

Madikay Senghore, Hannah M. Read, Priyali Oza…·Siouxsie Wiles

The paper develops a model to infer bacterial transmission using deep sequencing data from a mouse model, showing that within-host variant abundance differences can accurately identify transmission pairs.

DOI 10.1101/2022.10.17.512634

mousewhole-genome sequencing

𝕏 PostBluesky