Author

Peter W. Atkinson

University of California, RiversideORCID 0000-0001-7268-0584Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Organism:multiple species· 2 Research Focus:benchmarking· 1 Assay:CUT&Tag· 1 Research Focus:database / resource· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Patrick A. SchreineriD· 2 shared Cassandra L. EttingeriD· 1 shared Derreck Carter-House· 1 shared Frank J. ByrneiD· 1 shared Jason StajichiD· 1 shared Linda L. WallingiD· 1 shared Matthew A. ColliniD· 1 shared Rick A Redak· 1 shared

Activity by Year

2017-2021 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Patrick A. SchreinerORCID

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3 papers

Recent·Most cited

GenomicsG3 Genes Genomes GeneticsPeer-reviewedJul 20, 2021

Improved draft reference genome for the Glassy-winged Sharpshooter (Homalodisca vitripennis), a vector for Pierce's disease

Cassandra L. Ettinger, Frank J. Byrne, Matthew A. Collin…·Jason Stajich

The paper improves the reference genome of the glassy-winged sharpshooter, providing a higher-quality assembly and annotation, along with endosymbiont genomes for future research.

12 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 23, 2017

TruePaiR: Software for the Accurate Identification of Complementary piRNA Read Pairs in High-Throughput Sequencing Data

Patrick A. Schreiner, Peter W. Atkinson

TruePaiR identifies complementary piRNA read pairs in sRNA sequencing data to assess piRNA amplification across species and tissues.

DOI 10.1101/167452

multiple speciesCUT&Tag

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 22, 2017

piClusterBusteR: Software For Automated Classification And Characterization Of piRNA Cluster Loci

Patrick A. Schreiner, Peter W. Atkinson

piClusterBusteR classifies and characterizes piRNA cluster loci across species, providing annotated and unannotated sequences for downstream analysis.

3 citations

multiple speciesexperimental assay

𝕏 PostBluesky