Author

Virginie J. M. Verhoeven

Erasmus MCORCID 0000-0001-7359-7862Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 3 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Rachel SchotiD· 2 shared Tjakko J. van HamiD· 2 shared Alberta A. H. J. ThiadensiD· 1 shared Alexander HoischeniD· 1 shared Alice BrooksiD· 1 shared Anna Maria TracewskaiD· 1 shared Anneke J.A. KievitiD· 1 shared Bart de KoningiD· 1 shared

Activity by Year

2022-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Rachel SchotORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintMar 28, 2025

Synthetic epigenomes for open cross-platform episignature classifiers

Federico Ferraro, Mark Drost, Herma van der Linde…·Dmitrijs Rots

The paper develops MethaDory, a framework to train and validate DNAm-based classifiers for rare diseases using synthetic data, achieving high accuracy across multiple platforms.

6 citations

humanDNA methylation

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Genetic & Genomic MedicineFrontiers in Cell and Developmental BiologyPeer-reviewedFeb 3, 2023

Cost-effective sequence analysis of 113 genes in 1,192 probands with retinitis pigmentosa and Leber congenital amaurosis

Daan M. Panneman, Rebekkah J. Hitti‐Malin, Lara K. Holtes…·Susanne Roosing

The paper introduces a cost-effective smMIPs panel for genetic analysis of RP and LCA, achieving a 56% diagnostic yield comparable to WES.

29 citations

humanwhole-exome sequencing

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Genetic & Genomic MedicinemedRxivPreprintJun 5, 2022

RNA-sequencing improves diagnosis for neurodevelopmental disorders by identifying pathogenic non-coding variants and reinterpretation of coding variants

Jordy Dekker, Rachel Schot, Michiel Bongaerts…·Tjakko J. van Ham

This study uses RNA-seq to improve diagnosis of neurodevelopmental disorders by identifying non-coding variants and reinterpreting coding variants, increasing diagnostic yield by 12%.

3 citations

humanbulk RNA-seq

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