Author

Jorge Carrasco Muriel

Novo Nordisk FoundationORCID 0000-0001-7365-0299Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:bacteria (other)· 1 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Organism:E. coli· 1 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Christopher P. LongiD· 1 shared Lars Keld NielseniD· 1 shared Nikolaus SonnenscheiniD· 1 shared Teddy GrovesiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

4 top collaborators · 2 mutual co-author links

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1 shared paperSystems Biology

Christopher P. LongORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintMay 22, 2025

Bayesian Independent Component Analysis reconstructs independent modules of gene expression

Jorge Carrasco Muriel, Teddy Groves, Lars Keld Nielsen

This paper introduces a Bayesian Independent Component Analysis method to identify co-regulated gene modules and quantify uncertainty, improving integration of multi-strain and multi-omics data.

DOI 10.1101/2025.05.22.655463

bacteria (other)bulk RNA-seq

𝕏 PostBluesky

Systems BiologyMicrobiology SpectrumPeer-reviewedOct 16, 2023

Simultaneous application of enzyme and thermodynamic constraints to metabolic models using an updated Python implementation of GECKO

Jorge Carrasco Muriel, Christopher P. Long, Nikolaus Sonnenschein

This paper updates geckopy to improve enzyme-constraint modeling by integrating proteomics data and thermodynamic constraints, benchmarking against E. coli datasets.

8 citations

E. coliproteomics

𝕏 PostBluesky