Author

Giuliana Calia

University of California, San FranciscoORCID 0000-0001-7394-9565Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Systems Biology· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Assay:scRNA-seq· 2 Assay:spatial transcriptomics· 2 Approach:statistical model· 2 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Binyamin ZuckermaniD· 2 shared Leor S. WeinbergeriD· 2 shared Xinyue CheniD· 2 shared Neha KhetaniD· 1 shared Ximena Garcia ArceoiD· 1 shared

Activity by Year

2023-2024 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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2 shared papersSystems Biology

Binyamin ZuckermanORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintAug 9, 2024

Quantitative comparison of single-cell RNA sequencing versus single-molecule RNA imaging for quantifying transcriptional noise

Neha Khetan, Binyamin Zuckerman, Giuliana Calia…·Leor S. Weinberger

This paper compares scRNA-seq and smFISH for quantifying transcriptional noise, finding that scRNA-seq algorithms generally underestimate noise compared to smFISH.

1 citation

humanmouse

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Systems BiologybioRxivPreprintMar 14, 2023

Comparative analysis between RNA-seq and single-molecule RNA FISH indicates that the pyrimidine nucleobase idoxuridine (IdU) globally amplifies transcriptional noise

Giuliana Calia, Xinyue Chen, Binyamin Zuckerman, Leor S. Weinberger

The paper compares RNA-seq and single-molecule RNA FISH to show that IdU globally amplifies transcriptional noise across most genes.

8 citations

scRNA-seqspatial transcriptomics

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