Author

Charles Ryan

University of MichiganORCID 0000-0001-7476-9099Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:gene regulatory network inference· 2 Assay:Hi-C· 2 Organism:human· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Assay:ChIP-seq· 1

Frequent Co-Authors

Can CheniD· 2 shared Cooper M. StansburyiD· 2 shared Gabrielle A. DotsoniD· 2 shared Indika RajapakseiD· 2 shared Lindsey A. MuiriD· 2 shared Max S. WichaiD· 2 shared Stephen LindslyiD· 2 shared Alnawaz RehemtullaiD· 1 shared

Activity by Year

2021-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 43 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersGenomics

Can ChenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedSep 20, 2022

Deciphering Multi-way Interactions in the Human Genome

Gabrielle A. Dotson, Can Chen, Stephen Lindsly…·Indika Rajapakse

The paper maps multi-way chromatin contacts using long reads and identifies cell type-specific transcription clusters by integrating contacts with chromatin accessibility and gene expression.

48 citations

humanHi-C

𝕏 PostBluesky

GenomicsiSciencePeer-reviewedNov 16, 2021

Functional Organization of the Maternal and Paternal Human 4D Nucleome

Stephen Lindsly, Wenlong Jia, Haiming Chen…·Indika Rajapakse

The paper investigates allele-specific relationships between gene expression and genome structure in human cells using integrated haplotype-resolved data.

17 citations

humanChIP-seq

𝕏 PostBluesky