Author

Véronique Thomas‐Vaslin

InsermORCID 0000-0001-7521-8635Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Research Focus:gene regulatory network inference· 1 Organism:mouse· 1 Assay:proteomics· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Adrien SixiD· 1 shared Amel Benammar Elgaaïed· 1 shared Megan L. Mair· 1 shared Nicolas Tchitcheck· 1 shared Tarynn M. WitteniD· 1 shared Walid Bedhiafi· 1 shared

Activity by Year

2021-2022 · peak 1/yr

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6 top collaborators · 6 mutual co-author links

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1 shared paperBioinformatics

Adrien SixORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 27, 2022

OntoContext, a new python package for gene contextualization based on the annotation of biomedical texts

Walid Bedhiafi, Véronique Thomas‐Vaslin, Amel Benammar Elgaaïed, Adrien Six

OntoContext is a Python package that annotates biomedical texts with gene, RNA, and protein names in specific contexts using ontologies, outperforming NCBO Annotator in evaluations.

DOI 10.1101/2022.05.27.493696

proteomicsstatistical model

𝕏 PostBluesky

Systems BiologybioRxivPreprintSep 1, 2021

Network topology and evolution of the gene co-expression of T-cells during immuno-senescence

Megan L. Mair, Nicolas Tchitcheck, Tarynn M. Witten, Véronique Thomas‐Vaslin

The paper analyzes gene co-expression network structures in young and old mice T-cells to show aging-related changes in network organization and transcriptional regulation.

2 citations

mousebulk RNA-seq

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