Author

Tobias Rubel

Reed CollegeORCID 0000-0001-7658-4864Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Anna RitziD· 2 shared Pramesh SinghiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

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2 top collaborators · 1 mutual co-author link

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2 shared papersSystems Biology

Anna RitzORCID

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2 papers

Recent·Most cited

Systems BiologybioRxivPreprintAug 3, 2021

Stop Bickering! Reconciling Signaling Pathway Databases with Network Topologies

Tobias Rubel, Pramesh Singh, Anna Ritz

This paper quantifies structural differences in signaling pathway databases by analyzing their topological properties and shows that pathways have database-specific characteristics.

DOI 10.1101/2021.08.03.454954

statistical modelbenchmarking

𝕏 PostBluesky

BioinformaticsACM International Conference on Bioinformatics, Computational Biology, and Health Informatics (ACM-BCB)Peer-reviewedSep 21, 2020

Augmenting Signaling Pathway Reconstructions

Tobias Rubel, Anna Ritz

The paper introduces PRAUG, a framework that enhances existing pathway reconstruction algorithms, improving their performance across multiple signaling pathways.

5 citations

experimental assaybenchmarking

𝕏 PostBluesky