Author

Tao Xie

Pfizer (United States)ORCID 0000-0001-7658-6587Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Tao Xie1 paper · Kunming Institute of Botany

Biology Disciplines

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Bioinformatics· 2 Plant Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Chao-Hui HuangiD· 1 shared Crystal E. Valdez· 1 shared Donghui HuangiD· 1 shared Hao DuiD· 1 shared Jadwiga Renata Bienkowska· 1 shared James S. Hardwick· 1 shared Jennifer Kinong· 1 shared Jingwei Ma· 1 shared

Activity by Year

2018-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 16 mutual co-author links

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1 shared paperBioinformatics

Chao-Hui HuangORCID

Author profile →

3 papers

Recent·Most cited

Impact of floral traits on autoluminescence potential in Phalaenopsis orchids

Z M WANG, Jingwei Ma, Junshuo Qiu, Letian Lin, Xiaojuan Wang, Lichuan Chen, Hao Du, Tao Xie, Ruidong Jia, Yuexia Zhang, Jue Ruan, Junxia Wang, Zhimei Li, Peipei Wang

The paper assesses autoluminescence potential in Phalaenopsis orchids by analyzing floral traits and finds that color lightness, organ textures, and epidermal cell types are key predictors.

bioRxiv · May 24, 2026 · PreprintPlant Biology

AI-powered integration of multi-source data for TAA discovery to accelerate ADC and TCE drug development (I): TAA Target Identification and Prioritization

Tao Xie, Chao-Hui Huang

This paper introduces an AI framework for TAA target identification and prioritization by integrating multi-omics data and literature, aiming to improve ADC and TCE drug development.

bioRxiv · May 6, 2025 · PreprintBioinformatics

TNER: A Novel Background Error Suppression Method for Mutation Detection in Circulating Tumor DNA

Shibing Deng, Maruja Lira, Donghui Huang, Kai Wang, Crystal E. Valdez, Jennifer Kinong, Paul A. Rejto, Jadwiga Renata Bienkowska, James S. Hardwick, Tao Xie

TNER improves mutation detection in ctDNA by reducing background errors, outperforming existing methods on simulated and real data.

BMC Bioinformatics · Oct 20, 2018Peer-reviewedBioinformatics