Author

Jadwiga Renata Bienkowska

Pfizer (United States)

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Crystal E. Valdez· 1 shared Donghui HuangiD· 1 shared James S. Hardwick· 1 shared Jennifer Kinong· 1 shared Kai WangiD· 1 shared Maruja Lira· 1 shared Paul A. Rejto· 1 shared Shibing DengiD· 1 shared

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2018-2020 · peak 1/yr

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10 top collaborators · 36 mutual co-author links

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1 shared paperBioinformatics

Crystal E. Valdez

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2 papers

Recent·Most cited

BioinformaticsPLoS ONEPeer-reviewedAug 31, 2020

GeneTEFlow: A Nextflow-based pipeline for analysing gene and transposable elements expression from RNA-Seq data

Xiaochuan Liu, Jadwiga Renata Bienkowska, Wenyan Zhong

GeneTEFlow provides a Nextflow-based pipeline for analyzing gene and transposable element expression from RNA-Seq data, improving ease of use and integration.

9 citations

humanbulk RNA-seq

𝕏 PostBluesky

BioinformaticsBMC BioinformaticsPeer-reviewedOct 20, 2018

TNER: A Novel Background Error Suppression Method for Mutation Detection in Circulating Tumor DNA

Shibing Deng, Maruja Lira, Donghui Huang…·Tao Xie

TNER improves mutation detection in ctDNA by reducing background errors, outperforming existing methods on simulated and real data.

22 citations

whole-exome sequencingstatistical model

𝕏 PostBluesky