Author

Hannah K. Giannini

Vanderbilt UniversityORCID 0000-0001-7672-4716Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:drug response / drug discovery· 2 Organism:human· 2 Assay:scRNA-seq· 2 Approach:deep learning· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Approach:simulation· 1

Frequent Co-Authors

Alexander G. BickiD· 2 shared Alyssa ParkeriD· 2 shared David E. OngiD· 2 shared Jonathan Brett HeimlichiD· 2 shared Joseph C. Van AmburgiD· 2 shared Ravi MadduriiD· 2 shared Tarak NandiiD· 2 shared Yash PershadiD· 2 shared

Activity by Year

2024-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 44 mutual co-author links

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2 shared papersBioinformatics

Alexander G. BickORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 8, 2025

Closing the loop: Teaching single-cell foundation models to learn from perturbations

Yash Pershad, Tarak Nandi, Joseph C. Van Amburg…·Alexander G. Bick

The paper introduces a closed-loop framework for single-cell foundation models that incorporates perturbation data to improve prediction accuracy, identifying therapeutic targets and pathways in RUNX1-familial platelet disorder.

3 citations

humanscRNA-seq

Genetic & Genomic MedicinemedRxivPreprintFeb 20, 2024

Monocyte-endothelial interactions as a targetable node in clonal hematopoiesis-mediated cardiovascular disease

Alyssa Parker, Jonathan Brett Heimlich, Joseph C. Van Amburg…·Alexander G. Bick

The paper identifies monocyte-endothelial interaction alterations in TET2 CHIP and shows that targeting CXCR2 and ICAM1 can restore normal interactions.

1 citation

humanscRNA-seq