Author

Deena Jalal

Children Cancer HospitalORCID 0000-0001-7778-5166Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

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Ahmed A. SayediD· 1 shared Maryam LotfiiD· 1 shared

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2026-2026 · peak 1/yr

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1 shared paperBioinformatics

Ahmed A. SayedORCID

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1 paper

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BioinformaticsBMC BioinformaticsPeer-reviewedAug 13, 2026

plsMD: A plasmid reconstruction tool from short-read assemblies

Maryam Lotfi, Deena Jalal, Ahmed A. Sayed

plsMD improves plasmid reconstruction from short-read assemblies, outperforming existing tools in recall, precision, and F1 scores on benchmark and novel datasets.

5 citationstop 3%

whole-genome sequencingstatistical model

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