Author

Margaux David

KU LeuvenORCID 0000-0001-7806-8417Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:scRNA-seq· 2 Approach:benchmark study· 1 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Camilla PasqualiiD· 2 shared Changqing WangiD· 2 shared Kathleen ZeglinskiiD· 2 shared Matthew E. RitchieiD· 2 shared Michael B. ClarkiD· 2 shared Nadia M. DavidsoniD· 2 shared Quentin A. GouiliD· 2 shared Yair D. J. PraweriD· 2 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Camilla PasqualiORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 19, 2025

Igniting full-length isoform analysis in single-cell and spatial RNA-seq data with FLAMESv2

Changqing Wang, Yair D. J. Prawer, Oliver Voogd…·Yupei You

FLAMESv2 is a flexible R/Bioconductor package for analyzing long-read single-cell RNA-seq data, demonstrating field-leading performance in isoform analysis and cell-type identification.

3 citations

humanscRNA-seq

𝕏 PostBluesky

GenomicsbioRxivPreprintSep 11, 2025

Benchmarking long-read RNA-sequencing technologies with LongBench: a cross-platform reference dataset profiling cancer cell lines with bulk and single-cell approaches

Yupei You, Ashleigh N. Solano, James Lancaster…·Matthew E. Ritchie

LongBench benchmarks long-read RNA-sequencing technologies using a cross-platform dataset of cancer cell lines, showing high gene-level concordance but reduced transcript-level consistency across platforms.

14 citations

humanbulk RNA-seq

𝕏 PostBluesky