Author
Walter and Eliza Hall Institute of Medical ResearchORCID 0000-0003-1756-8922Unclaimed ORCID profile · follow to get notified of new preprints
4 papers
Recent·Most cited
Changqing Wang, Yair D. J. Prawer, Oliver Voogd…·Yupei You
FLAMESv2 is a flexible R/Bioconductor package for analyzing long-read single-cell RNA-seq data, demonstrating field-leading performance in isoform analysis and cell-type identification.
Shanika L. Amarasinghe, Phil Yang, Oliver Voogd…·Matthew E. Ritchie
scPipe provides a preprocessing pipeline for single-cell ATAC-Seq and multi-modal data in R/Bioconductor, enabling quality control and downstream analysis.
Luyi Tian, Jafar S. Jabbari, Rachel Thijssen…·Matthew E. Ritchie
The paper develops FLT-seq and FLAMES to characterize full-length isoforms in single cells of human and mouse, identifying thousands of unannotated isoforms and linking them to functional modules and drug resistance mutations.
Hasaru Kariyawasam, Shian Su, Oliver Voogd…·Charity W. Law
Glimma 2.0 enhances interactive RNA-seq analysis with reproducible R Markdown integration and improved visualization tools.