Author

Swarup Kumar Parida

National Institute of Plant Genome ResearchORCID 0000-0001-7843-3031Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Organism:plant (other)· 3 Approach:statistical model· 3 Research Focus:GWAS / association mapping· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Assay:GWAS summary statistics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Akhilesh Kumar TyagiiD· 2 shared Anurag DawareiD· 2 shared Durdam DasiD· 2 shared Rishi SrivastavaiD· 2 shared Amit Kumar SinghiD· 1 shared Ankit Malik· 1 shared ASHOK KUMAR SINGHiD· 1 shared C. GayacharaniD· 1 shared

Activity by Year

2022-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Akhilesh Kumar TyagiORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintFeb 25, 2023

An associative transcriptomics study on rice bean (Vigna umbellata) provides new insights into genetic basis and candidate genes governing flowering, maturity and seed weight

Tanmaya Kumar Sahu, Sachin Kumar Verma, C. Gayacharan…·Amit Kumar Singh

The paper identifies candidate genes associated with flowering, maturity, and seed weight in rice bean using transcriptome sequencing and GWAS analysis.

2 citations

plant (other)bulk RNA-seq

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BioinformaticsbioRxivPreprintFeb 3, 2022

GWAShub: A Web-based Resource to Democratize Genome-Wide Association Studies in Crop Plants

Anurag Daware, Rishi Srivastava, Durdam Das…·Swarup Kumar Parida

GWAShub provides a web-based platform for conducting GWAS in crop plants, demonstrating its utility by identifying histone methyltransferase genes linked to flowering time in chickpea.

DOI 10.1101/2022.02.03.479034

plant (other)GWAS summary statistics

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GenomicsbioRxivPreprintJan 19, 2022

Rice Pan-genome Array (RPGA): an efficient genotyping solution for pan-genome-based accelerated crop improvement in rice

Anurag Daware, Ankit Malik, Rishi Srivastava…·Swarup Kumar Parida

The paper develops a rice pan-genome genotyping array (RPGA) to capture genetic variation and improves GWAS by detecting novel loci and reducing reference bias.

2 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky