Author

Angela Liu

J. Craig Venter InstituteORCID 0000-0001-7902-538XUnclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Angela Liu1 paper

Biology Disciplines

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Bioinformatics· 1 Cell Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Organism:human· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Advait Jeevanandam· 1 shared Ajith V. PankajamiD· 1 shared Alexander GhinceaiD· 1 shared Beverly Peng· 1 shared Buqu HuiD· 1 shared Carol A. Feghali‐BostwickiD· 1 shared Changwan RyuiD· 1 shared Chris J. Lee· 1 shared

Activity by Year

2024-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperCell Biology

Advait Jeevanandam

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2 papers

Recent·Most cited

Discovery of optimal cell type classification marker genes from single cell RNA sequencing data

Angela Liu, Beverly Peng, Ajith V. Pankajam, Thu Elizabeth Duong, Gloria Pryhuber, Richard H. Scheuermann, Yun Zhang

NS-Forest v4.0 identifies optimal marker genes for cell type classification in scRNA-seq data, improving accuracy and selectivity for closely related cell types.

BMC Methods · Nov 3, 2024Peer-reviewedBioinformatics

A Nerve-Fibroblast Axis in Mammalian Lung Fibrosis

Genta Ishikawa, Xueyan Peng, Alexander Ghincea, John McGovern, Jana Zielonka, Advait Jeevanandam, Shuai Shao, Samuel Woo, Daisuke Okuno, Sheeline Yu, Chris J. Lee, Angela Liu, Tina Saber, Buqu Hu, Ying Sun, , Erica L. Herzog

The paper identifies a nerve-fibroblast axis in lung fibrosis by integrating multiple experimental and computational approaches across species.

bioRxiv · Sep 9, 2024 · PreprintCell Biology