Author

Sakila Z. Nazia

Weill Cornell MedicineORCID 0000-0001-8046-2384Unclaimed ORCID profile · follow to get notified of new preprints

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Bioinformatics· 1

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Organism:bacteria (other)· 1 Research Focus:clustering· 1 Assay:protein sequence· 1 Approach:statistical model· 1

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Adrián JinichiD· 1 shared Kyu Young RheeiD· 1 shared

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2022-2022 · peak 1/yr

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Adrián JinichORCID

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BioinformaticsbioRxivPreprintSep 27, 2022

Exploring protein sequence similarity with Protein Language UMAPs (PLUMAPs)

Adrián Jinich, Sakila Z. Nazia, Kyu Young Rhee

The paper introduces PLUMAPs, a tool that visualizes protein similarity using protein language models, dimensionality reduction, and topic modeling, showing improved clustering and interpretability compared to traditional sequence similarity networks.

DOI 10.1101/2022.09.27.509824

bacteria (other)protein sequence

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