Author

Megan Wind‐Rotolo

Bristol-Myers Squibb (United States)ORCID 0000-0001-8063-9928Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Adam M. FarkasiD· 1 shared Amir HorowitziD· 1 shared Ariella SassoniD· 1 shared Austin HakeiD· 1 shared Eric E. SchadtiD· 1 shared Güray AktürkiD· 1 shared Hao TangiD· 1 shared John P. SfakianosiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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1 shared paperGenomics

Adam M. FarkasORCID

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2 papers

Recent·Most cited

GenomicsClinical Cancer ResearchPeer-reviewedApr 9, 2021

Myeloid cell-associated resistance to PD-1/PD-L1 blockade in urothelial cancer revealed through bulk and single-cell RNA sequencing

Li Wang, John P. Sfakianos, Kristin G. Beaumont…·Matthew D. Galsky

The paper identifies proinflammatory monocytes/macrophages associated with resistance to PD-1/PD-L1 blockade in urothelial cancer using bulk and single-cell RNA sequencing.

97 citationstop 2%

humanbulk RNA-seq

GenomicsCancer ResearchPeer-reviewedOct 28, 2020

Mis-annotated multi nucleotide variants in public cancer genomics datasets can lead to inaccurate mutation calls with significant implications

Sujaya Srinivasan, Natallia Kalinava, Rafael Aldana…·Stefan A. Kirov

The paper identifies mis-annotated multi-nucleotide variants (MNVs) in cancer genomics datasets, showing they lead to incorrect amino acid change predictions and recommends merging SNVs into MNVs for accurate variant annotation.

17 citations

humanwhole-exome sequencing