Author

Fabien Joux

Centre National de la Recherche ScientifiqueORCID 0000-0001-8089-2771Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Ecology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Research Focus:ecology & biodiversity· 1 Research Focus:host-pathogen & immune response· 1 Assay:metagenomics· 1

Frequent Co-Authors

Antoine Bagnaro· 1 shared Bart HaegemaniD· 1 shared Corentin GouzieniD· 1 shared David DemoryiD· 1 shared Laurence GarczarekiD· 1 shared Mathieu ArdynaiD· 1 shared Maxine PruvotiD· 1 shared Samuel ChaffroniD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

8 top collaborators · 13 mutual co-author links

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1 shared paperMicrobiology

Antoine Bagnaro

Mutual co-authors in cluster

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2 papers

Recent·Most cited

MicrobiologybioRxivPreprintOct 3, 2026

Codon usage bias maps ocean microbiome adaptation to temperature-nutrients regimes

Corentin Gouzien, Antoine Bagnaro, Laurence Garczarek…·Samuel Chaffron

The paper shows that codon usage bias in metabolism-related genes reflects microbial adaptation to temperature and nutrient regimes in ocean communities.

DOI 10.64898/2026.10.02.755941

metagenomicsstatistical model

𝕏 PostBluesky

EcologyLimnology and OceanographyPeer-reviewedAug 1, 2026

Connecting models, networks and experiments: Revisiting the role of viruses in marine carbon cycling

Maxine Pruvot, Bart Haegeman, Fabien Joux, David Demory

This study integrates dynamical models, carbon flux networks, and direct measurements to better understand the role of viruses in marine carbon cycling.

DOI 10.1002/lno.70472

statistical modelhost-pathogen & immune response

𝕏 PostBluesky