BioinformaticsbioRxivPreprint
Rapid genotyping of viral samples using Illumina short-read sequencing data
Alex Váradi, Eszter Kaszab, Gábor Kardos…·Levente Laczkó
This paper presents a pipeline for rapid and accurate reference-based genotyping of viral samples using Illumina short-read sequencing data, showing reliable consensus genome reconstruction without manual curation.
DOI 10.1101/2022.03.21.485184