Xiao‐Xu Pang

D-plus improves introgression detection by addressing rate heterogeneity and ghost lineages, re-analyzing Jaltomata data to challenge prior interpretations.

The paper investigates hybrid speciation in the Anopheles gambiae complex, identifying reticulation events and ghost lineages that contributed to the origin of A. merus.

D-BPP detects ghost introgression in Panthera and Thuja by combining heuristic D-statistic with Bayesian phylogenomic inference.

This study shows that minor molecular clock deviations in shallow phylogenies can lead to high false-positive rates in introgression detection using site-pattern methods.

This study evaluates STRUCTURE's performance in detecting hybridization across phylogenetic scales, finding it ineffective for ancient or ghost admixtures.