Author

Jing Chen

Xi'an University of TechnologyORCID 0000-0001-8305-9291Unclaimed ORCID profile · follow to get notified of new preprints

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Jing Chen19 papers · Chinese Academy of Sciences

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Approach:deep learning· 2 Research Focus:batch correction / integration· 1 Research Focus:dimensionality reduction· 1 Research Focus:drug response / drug discovery· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Jiajie PengiD· 2 shared Jialu HuiD· 2 shared Tao WangiD· 2 shared Xuequn ShangiD· 2 shared Yongtian WangiD· 2 shared Chang XuiD· 1 shared Han ShuiD· 1 shared Qiang DengiD· 1 shared

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2024-2025 · peak 1/yr

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9 top collaborators · 33 mutual co-author links

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2 shared papersBioinformatics

Jiajie PengORCID

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2 papers

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedOct 1, 2025

Efficient integration of spatial omics data for joint domain detection, matching, and alignment with stMSA

Han Shu, Jing Chen, Chang Xu…·Tao Wang

This paper introduces stMSA, a deep learning model for integrating spatial omics data, improving domain detection, matching, and alignment across tissue slices.

11 citations

spatial transcriptomicsdeep learning

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJan 12, 2024

A multi-scale feature fusion model based on biological knowledge graph and transformer-encoder for drug-drug interaction prediction

Tao Wang, Qiang Deng, Jialu Hu…·Xuequn Shang

This paper introduces ALG-DDI, a multi-scale feature fusion model for drug-drug interaction prediction that outperforms existing methods by integrating attribute, local biological, and global semantic information.

5 citations

deep learningtransformer / foundation model

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