Author

Rosina A. Carr

University of Health and Allied SciencesORCID 0000-0001-8391-5633Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Peter Kojo QuashieiD· 3 shared Collins Misita Morang’aiD· 2 shared Redeemer Okekale SalamiiD· 2 shared Samuel Mawuli KumordziiD· 2 shared Abay SisayiD· 1 shared Alexander DiltheyiD· 1 shared Andreas BergthaleriD· 1 shared Andreas WalkeriD· 1 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersBioinformatics

Peter Kojo QuashieORCID

Mutual co-authors in cluster

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintNov 3, 2026

The Reasoning Paradox in Scientific Sandboxes: Why Extended Reasoning Fails in Autonomous Bioinformatics and How to Fix It.

Redeemer Okekale Salami, Derek Amuna, Rachel A. Akorful…·Samuel M. Kumordzi

This paper identifies two failure modes in extended reasoning models within bioinformatics tasks and introduces DTDR to improve accuracy and reduce errors.

DOI 10.64898/2026.10.30.763189

bulk RNA-seqscRNA-seq

𝕏 PostBluesky

BioinformaticsbioRxivPreprintOct 12, 2026

Tensorizing Pairwise Structural Analysis: GPU-Accelerated RMSD and FCC Clustering in HADDOCK3 Without Structural Regression.

Redeemer Okekale Salami, Samuel Mawuli Kumordzi, Derek Nsoh Amuna…·Peter K. Quashie

The paper accelerates structural analysis in HADDOCK3 by reformulating RMSD and FCC clustering as GPU-based linear algebra operations, achieving significant speedups without compromising accuracy.

DOI 10.64898/2026.10.10.758202

protein structurestatistical model

𝕏 PostBluesky

BioinformaticsNature MethodsPeer-reviewedFeb 9, 2026

Addressing pandemic-wide systematic errors in the SARS-CoV-2 phylogeny

Martin Hunt, Angie S. Hinrichs, Daniel Anderson…·Djin-Ye Oh

The paper reprocesses SARS-CoV-2 genomic data to correct systematic errors in phylogenies using a novel assembly tool, resulting in a cleaner global tree of 4.47 million samples.

19 citationstop 1%

viruswhole-genome sequencing

𝕏 PostBluesky