Caitlin E. Coombes

The paper applies topological data analysis to clinical data from CLL patients to identify complex structures like loops and voids, revealing prognostically important factors.

Mercator is an R package that visualizes distance matrices using multiple algorithms to help researchers compare different distance metrics in unsupervised data analysis.

Malachite automates gene enrichment meta-analyses across multiple datasets using ToppGene, identifying xenobiotic stimulus and NADP activity as enriched processes in smoking-related gene expression data.