Author

Midori Hashimoto

Japan Fisheries Research and Education AgencyORCID 0000-0001-8414-5028Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Assay:ChIP-seq· 1 Organism:human· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Alessandro GiulianiiD· 2 shared Masa Tsuchiya· 2 shared Andrzej KasperskiiD· 1 shared Giovanna ZimatoreiD· 1 shared Jekaterina A. ErenpreisaiD· 1 shared Kenichi YoshikawaiD· 1 shared

Activity by Year

2016-2021 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 11 mutual co-author links

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2 shared papersGenomics

Alessandro GiulianiORCID

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2 papers

Recent·Most cited

GenomicsBiophysics ReviewsPeer-reviewedSep 1, 2021

Self-Organization of Whole Gene Expression through Coordinated Chromatin Structural Transition: Validation of Self-Organized Critical Control of Genome Expression

Giovanna Zimatore, Masa Tsuchiya, Midori Hashimoto…·Alessandro Giuliani

The paper validates self-organized critical control of genome expression through coordinated chromatin structural transitions in MCF-7 breast-cancer cells using RQA and PCA.

33 citations

humanwhole-genome sequencing

𝕏 PostBluesky

GenomicsPLoS ONEPeer-reviewedDec 20, 2016

Self-Organizing Global Gene Expression Regulated Through Criticality: Mechanism of the Cell-Fate Change

Masa Tsuchiya, Alessandro Giuliani, Midori Hashimoto…·Kenichi Yoshikawa

The paper demonstrates that self-organized criticality regulates global gene expression during cell-fate changes, with critical states and perturbations driving dynamic transitions.

44 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky