Author

Joshua L. Schoenbachler

Vanderbilt University Medical CenterORCID 0000-0001-8544-6359Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:software / tool· 2 Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1

Frequent Co-Authors

Jacob HugheyiD· 2 shared

Activity by Year

2021-2022 · peak 1/yr

2 papers

Recent·Most cited

BioinformaticsPeerJPeer-reviewedNov 7, 2022

The seeker R package: simplified fetching and processing of transcriptome data

Joshua L. Schoenbachler, Jacob Hughey

The seeker R package simplifies fetching and processing of RNA-seq and microarray data by wrapping existing tools and providing a unified interface for analysis.

4 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky

BioinformaticsPeerJPeer-reviewedMar 11, 2021

pmparser and PMDB: resources for large-scale, open studies of the biomedical literature

Joshua L. Schoenbachler, Jacob Hughey

The paper introduces pmparser and PMDB, tools for converting and storing PubMed data to enable large-scale biomedical literature analysis.

3 citations

statistical modeldatabase / resource

𝕏 PostBluesky