Author

Shashank Gupta

Norwegian University of Life SciencesORCID 0000-0001-8839-7003Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Shashank Gupta2 papers · University of Copenhagen

Biology Disciplines

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Bioinformatics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Organism:human· 1 Assay:metabolomics· 1 Organism:mouse· 1

Frequent Co-Authors

Phillip Byron PopeiD· 2 shared Sabina Leanti La RosaiD· 2 shared Simen R. SandveiD· 2 shared Torgeir Rhoden HvidsteniD· 2 shared Ana Raquel Verissimo· 1 shared Anna NordborgiD· 1 shared Arturo Vera-Ponce de LeóniD· 1 shared Arturo Vera‐Ponce de León· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersBioinformatics

Phillip Byron PopeORCID

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2 papers

Recent·Most cited

BioinformaticsBioinformatics AdvancesPeer-reviewedJan 1, 2026

OmniCorr: An R-package for visualizing putative host-microbiota interactions using multi-omics data

Shashank Gupta, Veronica Quarato, Wanxin Lai…·Torgeir Rhoden Hvidsten

OmniCorr is an R package that clusters and visualizes multi-omics data to identify putative host-microbiota interactions across different biological systems.

1 citation

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MicrobiologyCommunications BiologyPeer-reviewedOct 25, 2024

The need for high-resolution gut microbiome characterization to design efficient strategies for sustainable aquaculture production

Shashank Gupta, Arturo Vera‐Ponce de León, Miyako Kodama…·Sabina Leanti La Rosa

This study evaluates microbiota-directed fibers (MDFs) in Atlantic salmon diets, finding negligible effects on gut microbiome and host physiology, but identifying potential endogenous lactic acid bacteria for future MDF strategies.

17 citations

non-human primatemetagenomics

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