Author

Shunsuke Koga

Mayo ClinicORCID 0000-0001-8868-9700Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetic & Genomic Medicine· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Organism:human· 3 Approach:statistical model· 3 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Dennis W. DicksoniD· 2 shared Owen A. RossiD· 2 shared Ryan J. UittiiD· 2 shared Zbigniew K. WszołekiD· 2 shared Adriano AguzziiD· 1 shared Alan J. ThomasiD· 1 shared Alberto RábanoiD· 1 shared Alex H. RajputiD· 1 shared

Activity by Year

2020-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Dennis W. DicksonORCID

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3 papers

Recent·Most cited

BioinformaticsFrontiers in BioinformaticsPeer-reviewedApr 15, 2026

SpatialFinder: A Human-in-the-Loop Vision-Language Framework for Prioritizing High-Value Regions in Spatial Transcriptomics

Jonathan Xu, Michelle Jiang, Shunsuke Koga…·Zhi Huang

SpatialFinder uses a vision-language model with human feedback to prioritize high-value regions in H&E slides for spatial transcriptomics, improving ROI selection accuracy.

2 citations

humanspatial transcriptomics

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Genetic & Genomic MedicineMovement DisordersPeer-reviewedAug 23, 2022

Genome-wide association study of autopsy-confirmed Multiple System Atrophy identifies common variants near ZIC1 and ZIC4

Franziska Hopfner, Anja K. Tietz, Viktoria Ruf…·Günter U. Höglinger

16 citations

humanGWAS summary statistics

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NeuroscienceActa Neuropathologica CommunicationsPeer-reviewedSep 17, 2020

Associations of Mitochondrial Genomic Variation with Corticobasal Degeneration, Progressive Supranuclear Palsy, and Neuropathological Tau Measures

Rebecca R. Valentino, Nikoleta Tamvaka, Michael G. Heckman…·Owen A. Ross

This study investigates associations between mitochondrial genomic variation and risk of Corticobasal Degeneration (CBD) and Progressive Supranuclear Palsy (PSP), as well as tau pathology measures in PSP.

13 citations

humanDNA methylation

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