Vivian Ng

The paper characterizes the genome-wide interaction between active histone modifications and DNA 6mA in Rhizopus microsporus, showing they define chromatin domains and regulate transcriptional stability.

The paper investigates DNA methylation-expression relationships in rice internode development using RNA-seq and bisulfite sequencing, finding specific methylation contexts correlate with gene expression patterns.

The paper uses DAP-seq to analyze TF binding sites in R. microsporus, revealing DNA methylation's role in gene regulation and expanding fungal motif catalogs.

This study uses multi-omics analysis to characterize Neurospora intermedia in oncom, revealing its role in byproduct conversion and potential for waste-to-food upcycling.

This study examines phenotypic and genotypic variation in Schizophyllum commune strains, finding high diversity in mushroom development and lignocellulose degradation, with conserved genes for these traits across genomes.

The paper improves the functional annotation of the mushroom-forming fungus Coprinopsis cinerea by integrating a chromosome-level genome assembly with extensive expression profiling across multiple conditions.

The paper uses long-read sequencing to resolve the complex structure of T-toxin biosynthesis genes in the fungus Cochliobolus heterostrophus and identifies translocation breakpoints associated with super-virulence.

The paper shows that secondary metabolism gene clusters in Xylariales fungi are linked to broader ecological roles and increased gene diversity.

This study identifies genomic traits of ectomycorrhizal transitions in Boletales by comparing gene repertoires and reconstructing gene duplication/loss histories.