Author

Vamsi K. Kodali

National Institutes of HealthORCID 0000-0001-8941-9761Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Organism:Arabidopsis· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:multiple species· 1 Approach:statistical model· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Terence D. MurphyiD· 2 shared Adam M. PhillippyiD· 1 shared Albin FontaineiD· 1 shared Alex R. HastieiD· 1 shared Alexander S. RaikheliD· 1 shared Alistair C. DarbyiD· 1 shared Allison M. WeakleyiD· 1 shared Andrea Asztalos· 1 shared

Activity by Year

2018-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersGenomics

Terence D. MurphyORCID

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2 papers

Recent·Most cited

Interactive visualization of whole eukaryote genome alignments using NCBI's Comparative Genome Viewer (CGV)

Sanjida H Rangwala, Dmitry Rudnev, Victor Ananiev, Andrea Asztalos, Barrett Benica, Evgeny A. Borodin, Nathan Bouk, Vladislav I. Evgeniev, Vamsi K. Kodali, Vadim Lotov, Eyal Mozes, Dong‐Ha Oh, Marina V. Omelchenko, Sofya Savkina, Ekaterina Sukharnikov, , Valérie Schneider

The paper introduces a new visualization tool, CGV, for analyzing whole genome alignments across species, enabling exploration of structural differences and gene annotations.

bioRxiv · Oct 30, 2023 · PreprintGenomics

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

Benjamin John Matthews, Olga Dudchenko, Sarah B. Kingan, Sergey Koren, Igor A. Antoshechkin, Jacob E. Crawford, William J. Glassford, Margaret Herre, Seth N. Redmond, Noah H. Rose, Gareth D. Weedall, Yang Wu, Sanjit Singh Batra, Carlos A. Brito-Sierra, Steven David Buckingham, , Leslie B. Vosshall

The paper presents an improved Aedes aegypti genome assembly, AaegL5, which enhances biological understanding and vector control efforts by resolving key genomic features and identifying new targets for intervention.

Nature · Nov 14, 2018Peer-reviewedGenomics