Author

Vaibhav Kumar Tamrakar

National Institute for Research in Tribal HealthORCID 0000-0001-9067-2406Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Organism:human· 1 Approach:statistical model· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Rob E. CarpenteriD· 3 shared Rahul SharmaiD· 2 shared Sadia AlmasiD· 2 shared Chase Rowan· 1 shared Emily BrowniD· 1 shared Harendra ChahariD· 1 shared Rahul SharmaiD· 1 shared Tyler VineiD· 1 shared

Activity by Year

2022-2022 · peak 3/yr

Co-Author Collaboration Network

8 top collaborators · 15 mutual co-author links

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3 shared papersGenomics

Rob E. CarpenterORCID

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3 papers

Recent·Most cited

GenomicsbioRxivPreprintNov 7, 2022

Optimization of the Illumina COVIDSeq™ protocol for decentralized, cost-effective genomic surveillance

Rob E. Carpenter, Vaibhav Kumar Tamrakar, Sadia Almas…·Rahul Sharma

The paper optimizes the Illumina COVIDSeq protocol to reduce costs while maintaining accuracy for decentralized SARS-CoV-2 genomic surveillance.

1 citation

whole-genome sequencingexperimental assay

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GenomicsbioRxivPreprintFeb 22, 2022

Confirming Multiplex Q-PCR Use in COVID-19 with Next Generation Sequencing: Strategies for Epidemiological Advantage

Rob E. Carpenter, Vaibhav Kumar Tamrakar, Harendra Chahar…·Rahul Sharma

This study compares Q-PCR and NGS for detecting SARS-CoV-2 variants, showing Q-PCR's effectiveness for screening known mutations in a cost-effective manner.

3 citations

humanbulk RNA-seq

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Genetic & Genomic MedicineArchives of Clinical and Biomedical ResearchPeer-reviewedJan 1, 2022

COVID Seq as Laboratory Developed Test (LDT) for diagnosis of SARS-CoV-2 Variants of Concern (VOC)

Rob E. Carpenter, Vaibhav Kumar Tamrakar, Sadia Almas…·Rahul Sharma

The paper validates the Illumina COVID-Seq assay as a laboratory-developed test for detecting SARS-CoV-2 variants with high specificity and accuracy.

13 citations

experimental assay

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