Author

Rui Qin

Agricultural Genomics Institute at ShenzhenORCID 0000-0001-9370-4290Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Research Focus:genome assembly· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Approach:experimental assay· 1

Frequent Co-Authors

Bing HeiD· 2 shared Peng CuiiD· 2 shared Qiang LiniD· 2 shared Sen WangiD· 2 shared Wanfei LiuiD· 2 shared Wei FaniD· 2 shared Bin TangiD· 1 shared Cheng PaniD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersBioinformatics

Bing HeORCID

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3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintApr 1, 2025

Synthesizing human-specific spike-in standards for RNA-seq experiments and assessing their technical performance

Rui Qin, Wei Fan, Feng Hua Ding…·Wanfei Liu

The paper develops human-specific RNA spike-in standards and evaluates their performance across sequencing platforms and library preparation methods.

1 citation

humanbulk RNA-seq

𝕏 PostBluesky

GenomicsGenomics Proteomics & BioinformaticsPeer-reviewedJul 30, 2021

A Chromosome-level Assembly of a Wild Castor Genome Provides New Insights into the Adaptive Evolution in a Tropical Desert

Jianjun Lu, Cheng Pan, Wei Fan…·Peng Cui

This study presents a chromosome-level genome assembly of wild castor, identifying genes under positive selection linked to adaptation to extreme environments.

45 citationstop 5%

plant (other)whole-genome sequencing

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GenomicsCommunications BiologyPeer-reviewedJan 29, 2021

Molecular basis of differential parasitism between non-encapsulated and encapsulated Trichinella revealed by a high-quality genome assembly

Xiaolei Liu, Yayan Feng, Xue Bai…·Fei Gao

The paper presents a high-quality genome assembly of non-encapsulated Trichinella and identifies genomic and epigenomic factors contributing to differences in parasitism between clades.

9 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky