Author

Jon Keatley

European Bioinformatics InstituteORCID 0000-0001-9485-1743Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:database / resource· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Adam FrankishiD· 1 shared Adrien MorisoniD· 1 shared Alexie PapanicolaouiD· 1 shared Andrea WinterbottomiD· 1 shared Andrew D. YatesiD· 1 shared Andrey G AzoviD· 1 shared Angel LeungiD· 1 shared Anita SureshiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenomics

Adam FrankishORCID

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2 papers

Recent·Most cited

GenomicsbioRxivPreprintSep 10, 2026

Apollo 3: Multi-Species Genome Curation

Garrett Stevens, Kyösti Sutinen, Dario Beraldi…·Ian H Holmes

Apollo 3 is a new manual genome annotation tool that integrates with JBrowse 2, enabling multi-genome editing and synteny visualization.

DOI 10.64898/2026.06.08.730970

experimental assaydatabase / resource

𝕏 PostBluesky

GenomicsNucleic Acids ResearchPeer-reviewedJul 27, 2026

A comprehensive AMR genotype-phenotype database (CABBAGE)

Emily Dickens, Romain Derelle, Robert Beardmore…·Leonid Chindelevitch

The paper introduces CABBAGE, a large-scale AMR genotype-phenotype database linking bacterial genomes to antibiotic susceptibility data and metadata, enabling analysis of resistance trends and predictive method benchmarks.

5 citationstop 2%

bacteria (other)whole-genome sequencing

𝕏 PostBluesky