Author

Paulo Marques Pierry

Universidade de São PauloORCID 0000-0001-9510-8257Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 2 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Organism:bacteria (other)· 2 Research Focus:benchmarking· 2 Approach:experimental assay· 2 Organism:human· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Assay:bulk RNA-seq· 1

Frequent Co-Authors

Adriano Bonaldi· 2 shared Aline Maria da SilvaiD· 2 shared Camila Alves SouzaiD· 2 shared Cristovam Scapulatempo‐NetoiD· 2 shared Darine VillelaiD· 2 shared Deibs BarbosaiD· 2 shared Joaquim MartinsiD· 2 shared José Eduardo KrolliD· 2 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Adriano Bonaldi

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4 papers

Recent·Most cited

GeneticsPathogensPeer-reviewedOct 28, 2026

Transcriptome profiling reveals differential expression of virulence genes in Xylella fastidiosa under nutrient-rich and xylem-like conditions

Paulo Marques Pierry, Oseias Rodrigues Feitosa-Junior, Joaquim Martins…·Paulo A. Zaini

This study compares transcriptomes of Xylella fastidiosa under nutrient-rich and xylem-like conditions, identifying differential gene expression and regulatory divergence between strains.

DOI 10.3390/pathogens15111129

bacteria (other)bulk RNA-seq

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Genetic & Genomic MedicineAnnals of Human GeneticsPeer-reviewedOct 9, 2023

Low-pass whole genome sequencing is a reliable and cost-effective approach for copy number variant analysis in the clinical setting

Patricia C. Mazzonetto, Darine Villela, Silvia Souza da Costa…·Carla Rosenberg

This study validates low-pass whole genome sequencing as a reliable and cost-effective method for detecting copy number variants in clinical settings.

17 citations

humanwhole-genome sequencing

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Genetic & Genomic MedicinemedRxivPreprintMar 28, 2023

HRD-One: CLINICAL VALIDATION AND PERFORMANCE ASSESSMENT. Comparison between Myriad's myChoice(R), SOPHiA GENETICS SOPHiA Homologous Recombination Solution(R) and AmoyDx HRD Focus Panel(R)

Rodrigo Guarischi‐Sousa, José Eduardo Kroll, Adriano Bonaldi…·Guilherme Lopes Yamamoto

HRD-One provides a reproducible HRD score with high concordance to myChoice(R) and identifies HRD in ovarian cancer samples with and without BRCA1/2 mutations.

4 citations

humanwhole-exome sequencing

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GenomicsbioRxivPreprintOct 17, 2021

Comparative genomics of Xylella fastidiosa suggests determinants of host-specificity and expands its mobile genetic elements repertoire

Guillermo Uceda-Campos, Oseias Rodrigues Feitosa-Junior, Caio R. N. Santiago…·Aline Maria da Silva

This paper compares 94 Xylella fastidiosa genomes to identify host-specificity determinants and expand knowledge of its mobile genetic elements, particularly prophages.

DOI 10.1101/2021.10.17.464729

bacteria (other)whole-genome sequencing

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