Author

Pamela Abshire

University of Maryland, College ParkORCID 0000-0001-9555-453XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Assay:electronic health records· 1 Assay:imaging· 1 Approach:matrix factorization· 1 Organism:rat· 1

Frequent Co-Authors

Kasun PathirageiD· 2 shared Alison J. ScottiD· 1 shared Aman Virmani· 1 shared Behtash BabadiiD· 1 shared Juan Zegers-DelgadoiD· 1 shared Nathan Renegar· 1 shared Reza Ghodssi AiD· 1 shared Ricardo C. AranedaiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersNeuroscience

Kasun PathirageORCID

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2 papers

Recent·Most cited

NeuroscienceJournal of Neuroscience MethodsPeer-reviewedMar 19, 2026

A fast and simple algorithm for accurate spike detection in HD-MEA recordings

Juan Zegers-Delgado, Nathan Renegar, Kasun Pathirage…·Ricardo C. Araneda

The paper introduces a spike detection method for HD-MEA recordings that improves spike detection during bursts and reduces computational cost compared to existing methods.

DOI 10.1016/j.jneumeth.2026.110750

electronic health recordsstatistical model

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BioinformaticsPLoS ONEPeer-reviewedOct 10, 2024

Interpretable dimensionality reduction and classification of mass spectrometry imaging data in a visceral pain model via non-negative matrix factorization

Kasun Pathirage, Aman Virmani, Alison J. Scott…·Pamela Abshire

This paper applies non-negative matrix factorization to reduce and classify mass spectrometry imaging data in a visceral pain model, achieving high accuracy in distinguishing pain conditions.

5 citations

ratimaging

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