Author

Roshan Kulkarni

Agricultural Research ServiceORCID 0000-0001-9578-866XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Organism:Arabidopsis· 1 Research Focus:clustering· 1 Assay:DNA methylation· 1 Research Focus:genome assembly· 1 Research Focus:phylogenetics / evolution· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Steven B. CannoniD· 2 shared David Fernández‐BacaiD· 1 shared David J. BertioliiD· 1 shared Ethalinda K. S. CannoniD· 1 shared Gregory E. MacDonaldiD· 1 shared Karin S. DormaniD· 1 shared Kelly D. Chenault ChamberliniD· 1 shared Lori M. Lincoln· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Steven B. CannonORCID

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2 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedNov 11, 2022

CAPG: Comprehensive Allopolyploid Genotyper

Roshan Kulkarni, Yudi Zhang, Steven B. Cannon, Karin S. Dorman

CAPG improves genotyping of allopolyploids by explicitly weighting read alignments against subgenomic references, reducing false heterozygous calls in whole genome sequencing data.

4 citations

plant (other)whole-genome sequencing

𝕏 PostBluesky

GenomicsG3 Genes Genomes GeneticsPeer-reviewedSep 4, 2020

Genotypic characterization of the U.S. peanut core collection

Paul Otyama, Roshan Kulkarni, Kelly D. Chenault Chamberlin…·Ethalinda K. S. Cannon

The paper genotypes a peanut core collection, identifies genetic clusters, and links them to botanical varieties and biogeography.

33 citations

ArabidopsisDNA methylation

𝕏 PostBluesky