Author

Shihab Dider

University of California, BerkeleyORCID 0000-0001-9647-3643Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:software / tool· 2 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Ian H HolmesiD· 2 shared Andrew Duncan· 1 shared Angel LeungiD· 1 shared Benjamin N. BimberiD· 1 shared Caroline BridgeiD· 1 shared Colin M. DieshiD· 1 shared Elliot A. HershbergiD· 1 shared Emma Guo· 1 shared

Activity by Year

2020-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Ian H HolmesORCID

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2 papers

Recent·Most cited

BioinformaticsGenome biologyPeer-reviewedApr 17, 2023

JBrowse 2: A modular genome browser with views of synteny and structural variation

Colin M. Diesh, Garrett Stevens, Peter Xie…·Ian H Holmes

JBrowse 2 is a genome browser with enhanced views for structural variation and synteny, offering modular design and multiple usage options.

866 citationstop 1%

experimental assaysoftware / tool

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedJul 13, 2020

Machine Boss: Rapid Prototyping of Bioinformatic Automata

Jordi Silvestre-Ryan, Yujie Wang, Mehak Sharma…·Ian H Holmes

Machine Boss streamlines the creation of bioinformatics HMMs by providing tools for automata manipulation, enabling rapid prototyping similar to regular expression construction.

2 citations

statistical modelsoftware / tool

𝕏 PostBluesky