Author

Jaire Alves Ferreira Filho

Universidade Estadual de Campinas (UNICAMP)ORCID 0000-0001-9690-7704Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:fungi (other)· 2 Research Focus:gene regulatory network inference· 1 Assay:proteomics· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Anete Pereira de SouzaiD· 3 shared Déborah Aires AlmeidaiD· 3 shared Maria Augusta Crivelente HortaiD· 3 shared Natália Faraj MuradiD· 2 shared Alexandre Hild AonoiD· 1 shared Aline Crucello· 1 shared Cláudio Benício Cardoso-SilvaiD· 1 shared Clelton A. SantosiD· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

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3 shared papersBioinformatics

Anete Pereira de SouzaORCID

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3 papers

Recent·Most cited

BioinformaticsFrontiers in GeneticsPeer-reviewedFeb 24, 2022

Network Analysis Reveals Different Cellulose Degradation Strategies across Trichoderma harzianum Strains Associated with XYR1 and CRE1

Rafaela Rossi Rosolen, Alexandre Hild Aono, Déborah Aires Almeida…·Anete Pereira de Souza

The paper compares cellulose degradation strategies in two Trichoderma harzianum strains using network analysis, revealing strain-specific regulatory differences involving XYR1 and CRE1.

DOI 10.3389/fgene.2022.807243

fungi (other)statistical model

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BioinformaticsJournal of BiotechnologyPeer-reviewedMay 13, 2021

The synergistic actions of hydrolytic genes reveal the mechanism of Trichoderma harzianum for cellulose degradation

Déborah Aires Almeida, Maria Augusta Crivelente Horta, Jaire Alves Ferreira Filho…·Anete Pereira de Souza

This study identifies synergistic gene and protein interactions in Trichoderma harzianum for cellulose degradation using transcriptomic and proteomic analyses.

28 citations

bulk RNA-seqstatistical model

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GenomicsBMC GenomicsPeer-reviewedNov 2, 2020

Integrative Genomic Analysis for the Bioprospection of Regulators and Accessory Enzymes Associated with Cellulose Degradation in a Filamentous Fungus (Trichoderma harzianum)

Jaire Alves Ferreira Filho, Maria Augusta Crivelente Horta, Clelton A. Santos…·Anete Pereira de Souza

The paper identifies CAZymes, transcription factors, and transporters in Trichoderma harzianum IOC3844 involved in cellulose degradation using genomic, transcriptomic, and exoproteomic data.

13 citations

fungi (other)whole-genome sequencing

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