Author

Yiming Zhang

University of ConnecticutORCID 0000-0001-9735-0418Unclaimed ORCID profile · follow to get notified of new preprints

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Yiming Zhang6 papers · The University of Tokyo

Biology Disciplines

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Bioinformatics· 1 Genetics· 1

Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Research Focus:clustering· 1 Assay:scRNA-seq· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Yufeng WuiD· 2 shared Haotian ZhangiD· 1 shared Jingwen PeiiD· 1 shared Rasmus NielseniD· 1 shared Teng Fei GaoiD· 1 shared

Activity by Year

2020-2025 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 6 mutual co-author links

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2 shared papersBioinformatics

Yufeng WuORCID

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2 papers

Recent·Most cited

BioinformaticsGenome ResearchPeer-reviewedDec 1, 2025

Large-scale Inference of Cell Lineage Trees and Genotype Calling from Noisy Single-Cell Data Using Efficient Local Search

Haotian Zhang, Yiming Zhang, Teng Fei Gao, Yufeng Wu

ScisTree2 infers cell lineage trees and calls genotypes from single-cell data, achieving higher accuracy and efficiency than existing methods.

4 citations

scRNA-seqstatistical model

𝕏 PostBluesky

GeneticsPLoS Computational BiologyPeer-reviewedAug 14, 2020

Inferring the ancestry of parents and grandparents from genetic data

Jingwen Pei, Yiming Zhang, Rasmus Nielsen, Yufeng Wu

This paper introduces a method to estimate ancestry proportions of an individual's parents and grandparents using genetic data, showing it can distinguish between different ancestry combinations in ancestors.

8 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky