Haotian Zhang

SpaceSequest provides a unified pipeline for analyzing spatial transcriptomics data from multiple platforms, enabling standardized processing, analysis, and visualization.

ScisTree2 infers cell lineage trees and calls genotypes from single-cell data, achieving higher accuracy and efficiency than existing methods.

ScisTreeCNA jointly infers cell lineage trees from SNVs and CNAs, achieving higher accuracy than methods using only one type of variant.

CompBioAgent provides a user-friendly tool powered by LLMs to explore scRNA-seq data through natural language queries and visualizations.

ScaleSC provides a GPU-accelerated single-cell RNA-seq analysis pipeline with 20x speedup and scalability for large datasets.