Jian‐Feng Mao

FastaGuard is a FASTA preflight QC tool that detects structural issues in assemblies and stops pipelines before expensive analysis, with high accuracy in identifying faults.

VariantFlow efficiently processes large variant datasets by selectively decoding only necessary fields, improving speed and memory usage compared to existing tools.

This paper introduces GAFM and HBP methods to improve GWAS fine-mapping by leveraging biological structure, achieving higher accuracy and speed across multiple species and datasets.

GraphPop reduces population genomics complexity by using graph databases, enabling faster analysis of large datasets and revealing population structure in rice and humans.

GraphMana manages population genomics data using a graph database, enabling efficient incremental updates and export to multiple formats.

This study identifies the hybrid origin of Populus tomentosa through genome sequencing and phylogenomic analysis, revealing it resulted from hybridization between Populus adenopoda and Populus alba var. pyramidalis around 3.93 Mya.