Author

Katherine M. Szigety

Children's Hospital of PhiladelphiaORCID 0000-0001-9754-6381Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Assay:electronic health records· 1 Organism:human· 1 Research Focus:software / tool· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Arjun MaggeiD· 1 shared Davy WeissenbacheriD· 1 shared Graciela Gonzalez‐HernandeziD· 1 shared Ian M. CampbelliD· 1 shared Jessica R. C. PriestleyiD· 1 shared Karen O’ConnoriD· 1 shared Mary J. Higgins· 1 shared Sarah F. Schmidt· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperGenetic & Genomic Medicine

Arjun MaggeORCID

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1 paper

Recent·Most cited

Genetic & Genomic MedicinemedRxivPreprintOct 16, 2023

PhenoID, a language model normalizer of physical examinations from genetics clinical notes

Davy Weissenbacher, Siddharth Rawal, Xinwei Zhao…·Ian M. Campbell

PhenoID is a transformer-based NLP system that normalizes dysmorphology exam findings into HPO terms, achieving state-of-the-art performance on phenotype extraction from clinical notes.

5 citations

humanelectronic health records

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