Author

Graciela Gonzalez‐Hernandez

Cedars-Sinai Medical CenterORCID 0000-0002-6416-9556Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetic & Genomic Medicine· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Research Focus:cell type annotation· 1 Research Focus:database / resource· 1 Assay:electronic health records· 1 Research Focus:genome assembly· 1 Organism:human· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Karen O’ConnoriD· 2 shared Arjun MaggeiD· 1 shared Davy WeissenbacheriD· 1 shared Ian M. CampbelliD· 1 shared Jessica R. C. PriestleyiD· 1 shared Katherine M. SzigetyiD· 1 shared Mary J. Higgins· 1 shared Matthew ScotchiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenetic & Genomic Medicine

Karen O’ConnorORCID

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2 papers

Recent·Most cited

A Metadata-Driven Framework for Strengthening Pathogen Genomics Lessons from SARS-CoV-2

Michael J. Pavia, Karen O’Connor, Graciela Gonzalez‐Hernandez, Matthew Scotch

This paper evaluates metadata completeness in SARS-CoV-2 genomic records and shows how enriched metadata improves genomic epidemiology analyses.

medRxiv · Nov 4, 2025 · PreprintGenetic & Genomic Medicine

PhenoID, a language model normalizer of physical examinations from genetics clinical notes

Davy Weissenbacher, Siddharth Rawal, Xinwei Zhao, Jessica R. C. Priestley, Katherine M. Szigety, Sarah F. Schmidt, Mary J. Higgins, Arjun Magge, Karen O’Connor, Graciela Gonzalez‐Hernandez, Ian M. Campbell

PhenoID is a transformer-based NLP system that normalizes dysmorphology exam findings into HPO terms, achieving state-of-the-art performance on phenotype extraction from clinical notes.

medRxiv · Oct 16, 2023 · PreprintGenetic & Genomic Medicine