Author

Sebastián Ayala‐Ruano

Novo Nordisk FoundationORCID 0000-0001-9756-6745Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:batch correction / integration· 1 Research Focus:benchmarking· 1 Approach:contrastive learning· 1 Research Focus:database / resource· 1 Research Focus:dimensionality reduction· 1 Assay:metagenomics· 1 Research Focus:software / tool· 1 Approach:variational autoencoder· 1

Frequent Co-Authors

Alberto SantosiD· 2 shared Henry Emanuel WebeliD· 2 shared Andre Ferreira CunhaiD· 1 shared Angel Luu PhanthanourakiD· 1 shared Atieh Gharib· 1 shared Edir VidaliD· 1 shared Juliana Assis GeraldoiD· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 21 mutual co-author links

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2 shared papersBioinformatics

Alberto SantosORCID

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2 papers

Recent·Most cited

BioinformaticsNucleic Acids ResearchPeer-reviewedFeb 24, 2026

ABaCo: Addressing Heterogeneity Challenges in Metagenomic Data Integration with Adversarial Generative Models

Edir Vidal, Angel Luu Phanthanourak, Atieh Gharib…·Alberto Santos

ABaCo integrates metagenomic data from multiple studies, corrects technical heterogeneity, and outperforms existing methods while preserving biological signals.

DOI 10.1093/nar/gkag227

metagenomicsvariational autoencoder

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BioinformaticsBioinformatics AdvancesPeer-reviewedDec 26, 2024

VueGen: Automating the generation of scientific reports

Sebastián Ayala‐Ruano, Henry Emanuel Webel, Alberto Santos

VueGen automates report generation from bioinformatics outputs, enabling non-experts to create reports with minimal coding experience.

DOI 10.1093/bioadv/vbaf149

software / tool

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