Author

Daniel N. Seidman

Cornell UniversityORCID 0000-0001-9848-9702Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:statistical model· 2 Research Focus:benchmarking· 1 Organism:human· 1 Research Focus:phylogenetics / evolution· 1 Assay:scRNA-seq· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Amy L. WilliamsiD· 1 shared Camir RickettsiD· 1 shared Donna M. LehmaniD· 1 shared Ehsan Haghshenas· 1 shared Faraz HachiD· 1 shared Farid Rashidi MehrabadiiD· 1 shared Iman HajirasoulihaiD· 1 shared Jens SannerudiD· 1 shared

Activity by Year

2019-2019 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperGenetics

Amy L. WilliamsORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

GeneticsPLoS GeneticsPeer-reviewedDec 20, 2019

Crossover interference and sex-specific genetic maps shape identical by descent sharing in close relatives

Madison Caballero, Daniel N. Seidman, Ying Qiao…·Amy L. Williams

The paper develops Ped-sim, a method to simulate genetic data for relatives, showing that sex-specific maps and crossover interference significantly affect IBD sharing patterns.

94 citationstop 5%

humanwhole-genome sequencing

BioinformaticsGenome ResearchPeer-reviewedNov 1, 2019

PhISCS - A Combinatorial Approach for Sub-perfect Tumor Phylogeny Reconstruction via Integrative use of Single Cell and Bulk Sequencing Data

Salem Malikić, Simone Ciccolella, Farid Rashidi Mehrabadi…·S. Cenk Şahinalp

PhISCS integrates single-cell and bulk sequencing data to reconstruct sub-perfect tumor phylogenies by minimizing false negatives, false positives, and ISA violations.

91 citations

scRNA-seqstatistical model