Author

Parag Katira

San Diego State UniversityORCID 0000-0001-9873-5117Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 2 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Stephanie I. FraleyiD· 2 shared Amy Turnlund· 1 shared Asona J. LuiiD· 1 shared Astha LamichhaneiD· 1 shared Audrey G HeadiD· 1 shared Badri Narayanan NarasimhaniD· 1 shared Blake GabeliD· 1 shared Carlos Luna LopeziD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersCancer Biology

Stephanie I. FraleyORCID

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2 papers

Recent·Most cited

Cancer BiologyCancer ResearchPeer-reviewedOct 26, 2026

The impact of patient biology on racial disparities in breast cancer outcome

Jerry Tyler DeWitt, D Jimenez-Tovar, Elena Oropeza…·Svasti Haricharan

This study identifies molecular differences in HR+ breast cancer between Black and White women, linking structural factors like poverty to tumor biology and immune signatures.

DOI 10.1158/0008-5472.can-25-5500

humanbulk RNA-seq

𝕏 PostBluesky

Systems BiologybioRxivPreprintMar 24, 2023

Predicting phenotype to mechanotype relationships in cells based on intra-cellular signaling network

Esra Tiftik Karabay, Amy Turnlund, Jessica Grear…·Parag Katira

The paper introduces a computational model to predict how cellular phenotypes influence mechanotype responses to external signals through intra-cellular signaling networks.

1 citation

statistical model

𝕏 PostBluesky