Author

Jingyuan Hu

Harvard UniversityORCID 0000-0001-9956-2131Unclaimed ORCID profile · follow to get notified of new preprints

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Jingyuan Hu1 paper · George Washington University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:trajectory inference· 2 Research Focus:clustering· 1 Research Focus:dimensionality reduction· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Organism:mouse· 1

Frequent Co-Authors

Rong MaiD· 2 shared Bin Yu· 1 shared Harinder SinghiD· 1 shared Jishnu DasiD· 1 shared Luca PinelloiD· 1 shared Xi Li· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 9 mutual co-author links

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2 shared papersBioinformatics

Rong MaORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintSep 24, 2026

FlowMap: Geometry Dynamics Consistent Embedding of RNA Velocity for Interpretable Cellular Trajectories

Jingyuan Hu, Harinder Singh, Jishnu Das…·Rong Ma

FlowMap jointly models cellular states and dynamics in a geometric framework, recovering interpretable trajectories and developmental patterns from single-cell RNA sequencing data.

DOI 10.64898/2026.09.21.753192

scRNA-seqstatistical model

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BioinformaticsbioRxivPreprintJun 27, 2025

Uncovering smooth structures in single-cell data with PCS-guided neighbor embeddings

Rong Ma, Xi Li, Jingyuan Hu, Bin Yu

The paper introduces NESS, a method to improve neighbor embeddings in single-cell data by leveraging stability, enabling better inference of smooth biological structures and cell-state transitions.

DOI 10.1101/2025.06.27.661958

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