Vincent Navratil

The paper benchmarks viral prediction tools in low-abundance metagenomes and finds that combining tools improves viral detection while reducing false positives.

pylifemap maps biological data onto the NCBI Taxonomy tree, enabling interactive visualization of datasets like the IUCN Red List and metagenomics results.

This study identifies discriminating regions in retroviral genomes to distinguish exogenous from endogenous sequences, revealing misannotations in viral databases and proposing criteria for accurate viral surveillance.

This study identifies two active endogenous retrovirus families in goats, revealing distinct evolutionary dynamics among ruminants.

This study reconstructs the metabolic pathways of the amphipod Gammarus fossarum using multi-omics data, revealing organ-specific metabolic profiles and validating enzyme expression through proteomics.

This study analyzes TE deregulation in mouse pancreatic tumors compared to healthy pancreas, finding that several TE families are associated with gene expression divergence in tumors.