Author

Siyi Luo

Rice UniversityORCID 0000-0002-0134-4492Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Anthony William MaressoiD· 1 shared Bryce KilleiD· 1 shared Ellen E. VaughaniD· 1 shared Justin R. ClarkiD· 1 shared Michael NuteiD· 1 shared Todd J. TreangeniD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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6 top collaborators · 15 mutual co-author links

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1 shared paperBioinformatics

Anthony William MaressoORCID

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1 paper

Recent·Most cited

BioinformaticsbioRxivPreprintOct 10, 2025

Strainify: Strain-Level Microbiome Profiling for Low-Coverage Short-Read Metagenomic Datasets

Siyi Luo, Bryce Kille, Ellen E. Vaughan…·Todd J. Treangen

Strainify estimates strain-level abundances from low-coverage short-read metagenomic data, outperforming existing methods in simulated and real datasets.

2 citations

metagenomicsstatistical model

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